Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rsph6aQ8CDR2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rsph6aQ8CDR2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rsph6aQ8CDR2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.15■□□□□ 0.82
Rsph6aQ8CDR2 Gm9385-201ENSMUST00000117563 472 ntBASIC20.15■□□□□ 0.82
Rsph6aQ8CDR2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC20.15■□□□□ 0.82
Rsph6aQ8CDR2 Gm27494-201ENSMUST00000184735 189 ntBASIC20.15■□□□□ 0.82
Rsph6aQ8CDR2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC20.15■□□□□ 0.82
Rsph6aQ8CDR2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC20.15■□□□□ 0.82
Rsph6aQ8CDR2 Gm43371-201ENSMUST00000202838 1031 ntBASIC20.15■□□□□ 0.82
Rsph6aQ8CDR2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rsph6aQ8CDR2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rsph6aQ8CDR2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rsph6aQ8CDR2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rsph6aQ8CDR2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Rsph6aQ8CDR2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rsph6aQ8CDR2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rsph6aQ8CDR2 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.14■□□□□ 0.82
Rsph6aQ8CDR2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph6aQ8CDR2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph6aQ8CDR2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph6aQ8CDR2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph6aQ8CDR2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rsph6aQ8CDR2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph6aQ8CDR2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph6aQ8CDR2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC20.14■□□□□ 0.81
Rsph6aQ8CDR2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph6aQ8CDR2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Rsph6aQ8CDR2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph6aQ8CDR2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph6aQ8CDR2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph6aQ8CDR2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph6aQ8CDR2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph6aQ8CDR2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph6aQ8CDR2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph6aQ8CDR2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 Rpph1-201ENSMUST00000175096 319 ntBASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 Gm45293-201ENSMUST00000209754 1812 ntBASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph6aQ8CDR2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Rsph6aQ8CDR2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rsph6aQ8CDR2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rsph6aQ8CDR2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rsph6aQ8CDR2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rsph6aQ8CDR2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rsph6aQ8CDR2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rsph6aQ8CDR2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rsph6aQ8CDR2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rsph6aQ8CDR2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rsph6aQ8CDR2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rsph6aQ8CDR2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms