Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc38Q8CDN8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc38Q8CDN8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc38Q8CDN8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc38Q8CDN8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc38Q8CDN8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc38Q8CDN8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc38Q8CDN8 Gm15165-201ENSMUST00000118140 502 ntBASIC17.27■□□□□ 0.36
Ccdc38Q8CDN8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.27■□□□□ 0.36
Ccdc38Q8CDN8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc38Q8CDN8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.27■□□□□ 0.36
Ccdc38Q8CDN8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc38Q8CDN8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc38Q8CDN8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc38Q8CDN8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc38Q8CDN8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc38Q8CDN8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc38Q8CDN8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc38Q8CDN8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc38Q8CDN8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc38Q8CDN8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Gm27357-201ENSMUST00000183754 135 ntBASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Gm33142-201ENSMUST00000193913 867 ntBASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc38Q8CDN8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Gm7284-201ENSMUST00000131667 944 ntBASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc38Q8CDN8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Gm15372-201ENSMUST00000120729 834 ntBASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Gm25745-201ENSMUST00000174945 133 ntBASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc38Q8CDN8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms