Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Gm13474-201ENSMUST00000122466 815 ntBASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.03□□□□□ -0.32
Tsen54Q8C2A2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Tsen54Q8C2A2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tsen54Q8C2A2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tsen54Q8C2A2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tsen54Q8C2A2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tsen54Q8C2A2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.02□□□□□ -0.32
Tsen54Q8C2A2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tsen54Q8C2A2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tsen54Q8C2A2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tsen54Q8C2A2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Tsen54Q8C2A2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tsen54Q8C2A2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tsen54Q8C2A2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tsen54Q8C2A2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Tsen54Q8C2A2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tsen54Q8C2A2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Gm12134-201ENSMUST00000122109 520 ntBASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Gm45058-201ENSMUST00000205810 766 ntBASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tsen54Q8C2A2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Mir5130-201ENSMUST00000175160 84 ntBASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tsen54Q8C2A2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms