Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.02■□□□□ 0.16
Trub1Q8C0D0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trub1Q8C0D0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trub1Q8C0D0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.02■□□□□ 0.16
Trub1Q8C0D0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trub1Q8C0D0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trub1Q8C0D0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trub1Q8C0D0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trub1Q8C0D0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.02■□□□□ 0.16
Trub1Q8C0D0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trub1Q8C0D0 Gm34391-201ENSMUST00000203706 907 ntBASIC16.02■□□□□ 0.16
Trub1Q8C0D0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.02■□□□□ 0.16
Trub1Q8C0D0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trub1Q8C0D0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trub1Q8C0D0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.02■□□□□ 0.15
Trub1Q8C0D0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trub1Q8C0D0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trub1Q8C0D0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trub1Q8C0D0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trub1Q8C0D0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trub1Q8C0D0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trub1Q8C0D0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trub1Q8C0D0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trub1Q8C0D0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trub1Q8C0D0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trub1Q8C0D0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trub1Q8C0D0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trub1Q8C0D0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16■□□□□ 0.15
Trub1Q8C0D0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trub1Q8C0D0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trub1Q8C0D0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Trub1Q8C0D0 Gm37584-201ENSMUST00000193595 1290 ntBASIC16■□□□□ 0.15
Trub1Q8C0D0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trub1Q8C0D0 Birc2-201ENSMUST00000054878 378 ntBASIC16■□□□□ 0.15
Trub1Q8C0D0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Trub1Q8C0D0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trub1Q8C0D0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trub1Q8C0D0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trub1Q8C0D0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trub1Q8C0D0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trub1Q8C0D0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trub1Q8C0D0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trub1Q8C0D0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trub1Q8C0D0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trub1Q8C0D0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Gm15358-201ENSMUST00000119249 520 ntBASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Gm11780-201ENSMUST00000136880 516 ntBASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Gm10819-201ENSMUST00000099988 561 ntBASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trub1Q8C0D0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms