Protein–RNA interactions for Protein: Q8BX32

Slx1b, Structure-specific endonuclease subunit SLX1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx1bQ8BX32 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx1bQ8BX32 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx1bQ8BX32 Gm12859-201ENSMUST00000117834 427 ntBASIC19.72■□□□□ 0.75
Slx1bQ8BX32 Ighv8-7-201ENSMUST00000194349 297 ntBASIC19.72■□□□□ 0.75
Slx1bQ8BX32 AC154239.3-201ENSMUST00000226933 674 ntBASIC19.72■□□□□ 0.75
Slx1bQ8BX32 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx1bQ8BX32 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx1bQ8BX32 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx1bQ8BX32 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slx1bQ8BX32 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx1bQ8BX32 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx1bQ8BX32 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx1bQ8BX32 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.72■□□□□ 0.75
Slx1bQ8BX32 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx1bQ8BX32 Gm15163-201ENSMUST00000120749 1302 ntBASIC19.72■□□□□ 0.75
Slx1bQ8BX32 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Slx1bQ8BX32 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx1bQ8BX32 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx1bQ8BX32 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx1bQ8BX32 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx1bQ8BX32 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx1bQ8BX32 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC19.71■□□□□ 0.75
Slx1bQ8BX32 Gm29667-201ENSMUST00000190817 490 ntBASIC19.71■□□□□ 0.75
Slx1bQ8BX32 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC19.71■□□□□ 0.75
Slx1bQ8BX32 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slx1bQ8BX32 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx1bQ8BX32 AC131743.5-201ENSMUST00000220775 1618 ntBASIC19.71■□□□□ 0.75
Slx1bQ8BX32 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx1bQ8BX32 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slx1bQ8BX32 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx1bQ8BX32 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slx1bQ8BX32 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx1bQ8BX32 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Slx1bQ8BX32 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Slx1bQ8BX32 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx1bQ8BX32 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx1bQ8BX32 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC19.7■□□□□ 0.74
Slx1bQ8BX32 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Slx1bQ8BX32 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx1bQ8BX32 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slx1bQ8BX32 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx1bQ8BX32 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx1bQ8BX32 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
Slx1bQ8BX32 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx1bQ8BX32 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx1bQ8BX32 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Slx1bQ8BX32 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.7■□□□□ 0.74
Slx1bQ8BX32 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Slx1bQ8BX32 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slx1bQ8BX32 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slx1bQ8BX32 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slx1bQ8BX32 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slx1bQ8BX32 Gm24543-201ENSMUST00000103867 82 ntBASIC19.69■□□□□ 0.74
Slx1bQ8BX32 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slx1bQ8BX32 Gm9719-201ENSMUST00000162765 543 ntBASIC19.69■□□□□ 0.74
Slx1bQ8BX32 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slx1bQ8BX32 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slx1bQ8BX32 AC164567.1-201ENSMUST00000219185 960 ntBASIC19.69■□□□□ 0.74
Slx1bQ8BX32 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC19.69■□□□□ 0.74
Slx1bQ8BX32 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slx1bQ8BX32 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slx1bQ8BX32 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slx1bQ8BX32 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slx1bQ8BX32 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slx1bQ8BX32 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slx1bQ8BX32 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slx1bQ8BX32 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx1bQ8BX32 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Slx1bQ8BX32 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.68■□□□□ 0.74
Slx1bQ8BX32 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Slx1bQ8BX32 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx1bQ8BX32 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC19.68■□□□□ 0.74
Slx1bQ8BX32 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slx1bQ8BX32 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slx1bQ8BX32 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx1bQ8BX32 Shd-206ENSMUST00000225145 998 ntBASIC19.68■□□□□ 0.74
Slx1bQ8BX32 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx1bQ8BX32 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC19.68■□□□□ 0.74
Slx1bQ8BX32 Gm6263-201ENSMUST00000120029 1342 ntBASIC19.68■□□□□ 0.74
Slx1bQ8BX32 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx1bQ8BX32 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slx1bQ8BX32 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC19.67■□□□□ 0.74
Slx1bQ8BX32 Gm6218-201ENSMUST00000219812 628 ntBASIC19.67■□□□□ 0.74
Slx1bQ8BX32 AC238811.1-201ENSMUST00000225302 441 ntBASIC19.67■□□□□ 0.74
Slx1bQ8BX32 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Slx1bQ8BX32 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slx1bQ8BX32 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slx1bQ8BX32 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.67■□□□□ 0.74
Slx1bQ8BX32 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Slx1bQ8BX32 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Slx1bQ8BX32 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Slx1bQ8BX32 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slx1bQ8BX32 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC19.66■□□□□ 0.74
Slx1bQ8BX32 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Slx1bQ8BX32 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slx1bQ8BX32 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Slx1bQ8BX32 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Slx1bQ8BX32 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slx1bQ8BX32 Cdk7-205ENSMUST00000225990 1159 ntBASIC19.66■□□□□ 0.74
Slx1bQ8BX32 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms