Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.74■□□□□ 0.11
Usp43Q8BUM9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp43Q8BUM9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp43Q8BUM9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp43Q8BUM9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp43Q8BUM9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp43Q8BUM9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Usp43Q8BUM9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Gm27646-201ENSMUST00000183989 110 ntBASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp43Q8BUM9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Gm6296-201ENSMUST00000222599 943 ntBASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp43Q8BUM9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp43Q8BUM9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp43Q8BUM9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp43Q8BUM9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp43Q8BUM9 BC037039-201ENSMUST00000192003 2205 ntBASIC15.71■□□□□ 0.11
Usp43Q8BUM9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp43Q8BUM9 Gm13418-201ENSMUST00000119097 944 ntBASIC15.71■□□□□ 0.11
Usp43Q8BUM9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.71■□□□□ 0.11
Usp43Q8BUM9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Usp43Q8BUM9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp43Q8BUM9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp43Q8BUM9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp43Q8BUM9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp43Q8BUM9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp43Q8BUM9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp43Q8BUM9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp43Q8BUM9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.71■□□□□ 0.1
Usp43Q8BUM9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Usp43Q8BUM9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Usp43Q8BUM9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Usp43Q8BUM9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp43Q8BUM9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms