Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atg4dQ8BGV9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atg4dQ8BGV9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atg4dQ8BGV9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Atg4dQ8BGV9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Atg4dQ8BGV9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Atg4dQ8BGV9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Atg4dQ8BGV9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Atg4dQ8BGV9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Gm27628-201ENSMUST00000184911 107 ntBASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Atg4dQ8BGV9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Gm45167-201ENSMUST00000208007 322 ntBASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4dQ8BGV9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Asic1-205ENSMUST00000228185 1818 ntBASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Atg4dQ8BGV9 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.42□□□□□ -0.1
Atg4dQ8BGV9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms