Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Samm50Q8BGH2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Samm50Q8BGH2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Samm50Q8BGH2 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.22■□□□□ 0.51
Samm50Q8BGH2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Samm50Q8BGH2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Samm50Q8BGH2 Gm24589-201ENSMUST00000116692 94 ntBASIC18.22■□□□□ 0.51
Samm50Q8BGH2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Samm50Q8BGH2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Samm50Q8BGH2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Samm50Q8BGH2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Samm50Q8BGH2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Samm50Q8BGH2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Samm50Q8BGH2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Samm50Q8BGH2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Samm50Q8BGH2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Samm50Q8BGH2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Samm50Q8BGH2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Samm50Q8BGH2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Samm50Q8BGH2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Samm50Q8BGH2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Samm50Q8BGH2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Samm50Q8BGH2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.19■□□□□ 0.5
Samm50Q8BGH2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Samm50Q8BGH2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Samm50Q8BGH2 Gm15372-201ENSMUST00000120729 834 ntBASIC18.19■□□□□ 0.5
Samm50Q8BGH2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.19■□□□□ 0.5
Samm50Q8BGH2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Samm50Q8BGH2 Gm44454-201ENSMUST00000198541 138 ntBASIC18.19■□□□□ 0.5
Samm50Q8BGH2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.19■□□□□ 0.5
Samm50Q8BGH2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Samm50Q8BGH2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Samm50Q8BGH2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.19■□□□□ 0.5
Samm50Q8BGH2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Samm50Q8BGH2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms