Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Gm8344-201ENSMUST00000119813 856 ntBASIC16.65■□□□□ 0.26
Trim65Q8BFW4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim65Q8BFW4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trim65Q8BFW4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Gm43347-201ENSMUST00000200226 580 ntBASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim65Q8BFW4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim65Q8BFW4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Gm27459-201ENSMUST00000184860 107 ntBASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Gm17971-201ENSMUST00000190239 806 ntBASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim65Q8BFW4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim65Q8BFW4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim65Q8BFW4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim65Q8BFW4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim65Q8BFW4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim65Q8BFW4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim65Q8BFW4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms