Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ttc28Q80XJ3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ttc28Q80XJ3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.99□□□□□ -0.33
Ttc28Q80XJ3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ttc28Q80XJ3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.99□□□□□ -0.33
Ttc28Q80XJ3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ttc28Q80XJ3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ttc28Q80XJ3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ttc28Q80XJ3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ttc28Q80XJ3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Gm15487-201ENSMUST00000122373 465 ntBASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Gm9794-201ENSMUST00000202370 423 ntBASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Gm28630-201ENSMUST00000187806 498 ntBASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Gm18062-201ENSMUST00000208020 547 ntBASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Gm18055-201ENSMUST00000208254 547 ntBASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc28Q80XJ3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Gm6415-201ENSMUST00000118488 348 ntBASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Gm9824-201ENSMUST00000178707 561 ntBASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Gm44855-201ENSMUST00000205725 362 ntBASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc28Q80XJ3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms