Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 Gm8318-201ENSMUST00000182954 872 ntBASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp6nlQ80XC3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Usp6nlQ80XC3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp6nlQ80XC3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Usp6nlQ80XC3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp6nlQ80XC3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp6nlQ80XC3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp6nlQ80XC3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.08■□□□□ 0.33
Usp6nlQ80XC3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.08■□□□□ 0.33
Usp6nlQ80XC3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp6nlQ80XC3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Gm25948-201ENSMUST00000175334 112 ntBASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Gm43125-201ENSMUST00000201724 730 ntBASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp6nlQ80XC3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms