Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.05■□□□□ 0.16
Trim62Q80V85 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trim62Q80V85 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 Gm12350-201ENSMUST00000121208 462 ntBASIC16.05■□□□□ 0.16
Trim62Q80V85 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.05■□□□□ 0.16
Trim62Q80V85 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.05■□□□□ 0.16
Trim62Q80V85 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.05■□□□□ 0.16
Trim62Q80V85 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Trim62Q80V85 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim62Q80V85 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trim62Q80V85 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Trim62Q80V85 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trim62Q80V85 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Trim62Q80V85 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trim62Q80V85 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.04■□□□□ 0.16
Trim62Q80V85 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Trim62Q80V85 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.04■□□□□ 0.16
Trim62Q80V85 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trim62Q80V85 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim62Q80V85 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim62Q80V85 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim62Q80V85 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim62Q80V85 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim62Q80V85 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim62Q80V85 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim62Q80V85 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Trim62Q80V85 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim62Q80V85 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Trim62Q80V85 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim62Q80V85 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim62Q80V85 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim62Q80V85 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim62Q80V85 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trim62Q80V85 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Trim62Q80V85 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim62Q80V85 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim62Q80V85 Gm13036-201ENSMUST00000117799 748 ntBASIC16.03■□□□□ 0.16
Trim62Q80V85 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim62Q80V85 Gm5682-201ENSMUST00000173402 505 ntBASIC16.03■□□□□ 0.16
Trim62Q80V85 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim62Q80V85 Gm9682-201ENSMUST00000197505 556 ntBASIC16.03■□□□□ 0.16
Trim62Q80V85 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.03■□□□□ 0.16
Trim62Q80V85 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim62Q80V85 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim62Q80V85 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Trim62Q80V85 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trim62Q80V85 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trim62Q80V85 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim62Q80V85 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim62Q80V85 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim62Q80V85 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim62Q80V85 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.03■□□□□ 0.16
Trim62Q80V85 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trim62Q80V85 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim62Q80V85 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Trim62Q80V85 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim62Q80V85 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim62Q80V85 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trim62Q80V85 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim62Q80V85 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim62Q80V85 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim62Q80V85 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms