Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC23.86■■□□□ 1.41
Rpap1Q80TE0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC23.86■■□□□ 1.41
Rpap1Q80TE0 Gm7730-201ENSMUST00000212486 454 ntBASIC23.86■■□□□ 1.41
Rpap1Q80TE0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rpap1Q80TE0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Rpap1Q80TE0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rpap1Q80TE0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rpap1Q80TE0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rpap1Q80TE0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rpap1Q80TE0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Rpap1Q80TE0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rpap1Q80TE0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rpap1Q80TE0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rpap1Q80TE0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rpap1Q80TE0 Gm15487-201ENSMUST00000122373 465 ntBASIC23.85■■□□□ 1.41
Rpap1Q80TE0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Rpap1Q80TE0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Rpap1Q80TE0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC23.85■■□□□ 1.41
Rpap1Q80TE0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Rpap1Q80TE0 Gm38225-201ENSMUST00000194001 393 ntBASIC23.85■■□□□ 1.41
Rpap1Q80TE0 CT010506.4-201ENSMUST00000225457 351 ntBASIC23.85■■□□□ 1.41
Rpap1Q80TE0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rpap1Q80TE0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rpap1Q80TE0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC23.85■■□□□ 1.41
Rpap1Q80TE0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Rpap1Q80TE0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rpap1Q80TE0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Rpap1Q80TE0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC23.85■■□□□ 1.41
Rpap1Q80TE0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC23.85■■□□□ 1.41
Rpap1Q80TE0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rpap1Q80TE0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rpap1Q80TE0 Gm7488-201ENSMUST00000117148 684 ntBASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Gm14719-201ENSMUST00000121891 340 ntBASIC23.84■■□□□ 1.41
Rpap1Q80TE0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Gm25144-201ENSMUST00000179561 110 ntBASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Gm25352-201ENSMUST00000179815 110 ntBASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Gm8116-201ENSMUST00000182917 1201 ntBASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Gm7653-201ENSMUST00000214567 508 ntBASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rpap1Q80TE0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC23.83■■□□□ 1.41
Rpap1Q80TE0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Rpap1Q80TE0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rpap1Q80TE0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rpap1Q80TE0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rpap1Q80TE0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC23.83■■□□□ 1.41
Rpap1Q80TE0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rpap1Q80TE0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rpap1Q80TE0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rpap1Q80TE0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC23.83■■□□□ 1.4
Rpap1Q80TE0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Rpap1Q80TE0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC23.83■■□□□ 1.4
Rpap1Q80TE0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rpap1Q80TE0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rpap1Q80TE0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rpap1Q80TE0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rpap1Q80TE0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rpap1Q80TE0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC23.82■■□□□ 1.4
Rpap1Q80TE0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC23.82■■□□□ 1.4
Rpap1Q80TE0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Rpap1Q80TE0 Gm6473-201ENSMUST00000188572 1210 ntBASIC23.82■■□□□ 1.4
Rpap1Q80TE0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Rpap1Q80TE0 Gm9063-201ENSMUST00000223299 582 ntBASIC23.82■■□□□ 1.4
Rpap1Q80TE0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rpap1Q80TE0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Rpap1Q80TE0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC23.82■■□□□ 1.4
Rpap1Q80TE0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rpap1Q80TE0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rpap1Q80TE0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC23.82■■□□□ 1.4
Rpap1Q80TE0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rpap1Q80TE0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC23.82■■□□□ 1.4
Rpap1Q80TE0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpap1Q80TE0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpap1Q80TE0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Rpap1Q80TE0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpap1Q80TE0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpap1Q80TE0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpap1Q80TE0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpap1Q80TE0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpap1Q80TE0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpap1Q80TE0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC23.81■■□□□ 1.4
Rpap1Q80TE0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpap1Q80TE0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpap1Q80TE0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms