Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38bQ80SY5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Prpf38bQ80SY5 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Prpf38bQ80SY5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38bQ80SY5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 Gm11764-201ENSMUST00000120221 623 ntBASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38bQ80SY5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Mir1895-201ENSMUST00000122615 79 ntBASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Gm23547-201ENSMUST00000158210 271 ntBASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms