Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp3Q7TNH6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp3Q7TNH6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp3Q7TNH6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp3Q7TNH6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp3Q7TNH6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp3Q7TNH6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp3Q7TNH6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp3Q7TNH6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp3Q7TNH6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nphp3Q7TNH6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nphp3Q7TNH6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nphp3Q7TNH6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nphp3Q7TNH6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nphp3Q7TNH6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nphp3Q7TNH6 Gm9727-201ENSMUST00000161387 555 ntBASIC18.83■□□□□ 0.61
Nphp3Q7TNH6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.83■□□□□ 0.61
Nphp3Q7TNH6 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.83■□□□□ 0.61
Nphp3Q7TNH6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.83■□□□□ 0.61
Nphp3Q7TNH6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nphp3Q7TNH6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nphp3Q7TNH6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nphp3Q7TNH6 Grk6-207ENSMUST00000225925 2769 ntBASIC18.83■□□□□ 0.6
Nphp3Q7TNH6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.83■□□□□ 0.6
Nphp3Q7TNH6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Nphp3Q7TNH6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp3Q7TNH6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp3Q7TNH6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp3Q7TNH6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp3Q7TNH6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp3Q7TNH6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp3Q7TNH6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp3Q7TNH6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Nphp3Q7TNH6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.83■□□□□ 0.6
Nphp3Q7TNH6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp3Q7TNH6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp3Q7TNH6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp3Q7TNH6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.83■□□□□ 0.6
Nphp3Q7TNH6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 App-207ENSMUST00000227737 2827 ntBASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Gm27300-201ENSMUST00000184085 97 ntBASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Gm27335-201ENSMUST00000184758 97 ntBASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp3Q7TNH6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nphp3Q7TNH6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Gm14722-201ENSMUST00000118943 689 ntBASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms