Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Slc46a1Q6PEM8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.67□□□□□ -0.22
Slc46a1Q6PEM8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc46a1Q6PEM8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc46a1Q6PEM8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc46a1Q6PEM8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc46a1Q6PEM8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Slc46a1Q6PEM8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc46a1Q6PEM8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc46a1Q6PEM8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc46a1Q6PEM8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Slc46a1Q6PEM8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Slc46a1Q6PEM8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc46a1Q6PEM8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Slc46a1Q6PEM8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Gm8344-201ENSMUST00000119813 856 ntBASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc46a1Q6PEM8 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.65□□□□□ -0.23
Slc46a1Q6PEM8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Slc46a1Q6PEM8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc46a1Q6PEM8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc46a1Q6PEM8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Slc46a1Q6PEM8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc46a1Q6PEM8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc46a1Q6PEM8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc46a1Q6PEM8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc46a1Q6PEM8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc46a1Q6PEM8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc46a1Q6PEM8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms