Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf220Q6PDX6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf220Q6PDX6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf220Q6PDX6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Gm13168-201ENSMUST00000121771 632 ntBASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf220Q6PDX6 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Gm7791-201ENSMUST00000219066 539 ntBASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Odf3b-204ENSMUST00000227834 930 ntBASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf220Q6PDX6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms