Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim37Q6PCX9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim37Q6PCX9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.22■□□□□ 0.35
Trim37Q6PCX9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim37Q6PCX9 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.22■□□□□ 0.35
Trim37Q6PCX9 Gm8655-201ENSMUST00000221159 852 ntBASIC17.22■□□□□ 0.35
Trim37Q6PCX9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim37Q6PCX9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim37Q6PCX9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim37Q6PCX9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim37Q6PCX9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim37Q6PCX9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim37Q6PCX9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim37Q6PCX9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.22■□□□□ 0.35
Trim37Q6PCX9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim37Q6PCX9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trim37Q6PCX9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim37Q6PCX9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.21■□□□□ 0.35
Trim37Q6PCX9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim37Q6PCX9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim37Q6PCX9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.2■□□□□ 0.34
Trim37Q6PCX9 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim37Q6PCX9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms