Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Gm9727-201ENSMUST00000161387 555 ntBASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Hmgb4Q6P8W9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgb4Q6P8W9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgb4Q6P8W9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgb4Q6P8W9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgb4Q6P8W9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgb4Q6P8W9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Hmgb4Q6P8W9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgb4Q6P8W9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgb4Q6P8W9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Gm6736-201ENSMUST00000166583 948 ntBASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Gm27646-201ENSMUST00000183989 110 ntBASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgb4Q6P8W9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Gm43575-201ENSMUST00000196420 516 ntBASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgb4Q6P8W9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Gm4995-201ENSMUST00000117247 432 ntBASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.24■□□□□ 0.19
Hmgb4Q6P8W9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms