Protein–RNA interactions for Protein: Q66JQ7

Knl1, Kinetochore scaffold 1, mousemouse

Predictions only

Length 1,612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1Q66JQ7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC21.62■■□□□ 1.05
Knl1Q66JQ7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Knl1Q66JQ7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Knl1Q66JQ7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Knl1Q66JQ7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Knl1Q66JQ7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Knl1Q66JQ7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC21.62■■□□□ 1.05
Knl1Q66JQ7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Knl1Q66JQ7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Knl1Q66JQ7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC21.61■■□□□ 1.05
Knl1Q66JQ7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Knl1Q66JQ7 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC21.61■■□□□ 1.05
Knl1Q66JQ7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Knl1Q66JQ7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Knl1Q66JQ7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC21.61■■□□□ 1.05
Knl1Q66JQ7 Gm45668-201ENSMUST00000211271 493 ntBASIC21.61■■□□□ 1.05
Knl1Q66JQ7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Knl1Q66JQ7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Knl1Q66JQ7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Knl1Q66JQ7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC21.61■■□□□ 1.05
Knl1Q66JQ7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Knl1Q66JQ7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Gm18062-201ENSMUST00000208020 547 ntBASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Gm18055-201ENSMUST00000208254 547 ntBASIC21.6■■□□□ 1.05
Knl1Q66JQ7 CT010506.4-201ENSMUST00000225457 351 ntBASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Knl1Q66JQ7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Gm5566-201ENSMUST00000116118 459 ntBASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Gm15635-204ENSMUST00000208024 2539 ntBASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Knl1Q66JQ7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC21.58■■□□□ 1.05
Knl1Q66JQ7 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Knl1Q66JQ7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Knl1Q66JQ7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Knl1Q66JQ7 Gm5320-201ENSMUST00000207163 1519 ntBASIC21.58■■□□□ 1.05
Knl1Q66JQ7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC21.58■■□□□ 1.05
Knl1Q66JQ7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Knl1Q66JQ7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Knl1Q66JQ7 Gm11478-201ENSMUST00000117851 599 ntBASIC21.58■■□□□ 1.04
Knl1Q66JQ7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Knl1Q66JQ7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC21.58■■□□□ 1.04
Knl1Q66JQ7 Gm18018-201ENSMUST00000198273 408 ntBASIC21.58■■□□□ 1.04
Knl1Q66JQ7 Gm45195-201ENSMUST00000205597 1008 ntBASIC21.58■■□□□ 1.04
Knl1Q66JQ7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Knl1Q66JQ7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC21.58■■□□□ 1.04
Knl1Q66JQ7 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Knl1Q66JQ7 Shd-206ENSMUST00000225145 998 ntBASIC21.58■■□□□ 1.04
Knl1Q66JQ7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Knl1Q66JQ7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Knl1Q66JQ7 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Knl1Q66JQ7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC21.57■■□□□ 1.04
Knl1Q66JQ7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Knl1Q66JQ7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC21.57■■□□□ 1.04
Knl1Q66JQ7 Gm6007-201ENSMUST00000208170 823 ntBASIC21.57■■□□□ 1.04
Knl1Q66JQ7 AC149294.4-201ENSMUST00000227870 882 ntBASIC21.57■■□□□ 1.04
Knl1Q66JQ7 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Knl1Q66JQ7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC21.57■■□□□ 1.04
Knl1Q66JQ7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Knl1Q66JQ7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Knl1Q66JQ7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Knl1Q66JQ7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Knl1Q66JQ7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Knl1Q66JQ7 Gm4204-201ENSMUST00000110798 1231 ntBASIC21.56■■□□□ 1.04
Knl1Q66JQ7 Gm42612-201ENSMUST00000197986 623 ntBASIC21.56■■□□□ 1.04
Knl1Q66JQ7 Gm43170-201ENSMUST00000199827 612 ntBASIC21.56■■□□□ 1.04
Knl1Q66JQ7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Knl1Q66JQ7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Knl1Q66JQ7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC21.56■■□□□ 1.04
Knl1Q66JQ7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms