Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Gm15794-201ENSMUST00000120182 631 ntBASIC11.83□□□□□ -0.52
Zfp248Q640N4 Gm25406-201ENSMUST00000157599 105 ntBASIC11.83□□□□□ -0.52
Zfp248Q640N4 Gm6659-201ENSMUST00000174752 547 ntBASIC11.83□□□□□ -0.52
Zfp248Q640N4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp248Q640N4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Zfp248Q640N4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.82□□□□□ -0.52
Zfp248Q640N4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Gm13836-201ENSMUST00000121159 501 ntBASIC11.82□□□□□ -0.52
Zfp248Q640N4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Rprl3-201ENSMUST00000157400 290 ntBASIC11.82□□□□□ -0.52
Zfp248Q640N4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp248Q640N4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms