Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcanQ62059 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.45□□□□□ -0.1
VcanQ62059 Gm45841-201ENSMUST00000207700 164 ntBASIC14.45□□□□□ -0.1
VcanQ62059 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.45□□□□□ -0.1
VcanQ62059 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VcanQ62059 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcanQ62059 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcanQ62059 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcanQ62059 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcanQ62059 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcanQ62059 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcanQ62059 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.45□□□□□ -0.1
VcanQ62059 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.45□□□□□ -0.1
VcanQ62059 Gm27533-201ENSMUST00000183800 152 ntBASIC14.45□□□□□ -0.1
VcanQ62059 Gm18246-201ENSMUST00000221023 728 ntBASIC14.45□□□□□ -0.1
VcanQ62059 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.45□□□□□ -0.1
VcanQ62059 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcanQ62059 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.44□□□□□ -0.1
VcanQ62059 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Gm13226-201ENSMUST00000117838 404 ntBASIC14.44□□□□□ -0.1
VcanQ62059 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.44□□□□□ -0.1
VcanQ62059 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.44□□□□□ -0.1
VcanQ62059 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
VcanQ62059 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
VcanQ62059 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VcanQ62059 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VcanQ62059 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
VcanQ62059 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VcanQ62059 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VcanQ62059 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.43□□□□□ -0.1
VcanQ62059 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VcanQ62059 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.43□□□□□ -0.1
VcanQ62059 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.43□□□□□ -0.1
VcanQ62059 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
VcanQ62059 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.43□□□□□ -0.1
VcanQ62059 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VcanQ62059 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.43□□□□□ -0.1
VcanQ62059 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.43□□□□□ -0.1
VcanQ62059 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcanQ62059 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
VcanQ62059 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.42□□□□□ -0.1
VcanQ62059 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
VcanQ62059 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.42□□□□□ -0.1
VcanQ62059 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.42□□□□□ -0.1
VcanQ62059 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms