Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd47Q61735 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd47Q61735 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd47Q61735 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd47Q61735 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd47Q61735 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cd47Q61735 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd47Q61735 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cd47Q61735 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd47Q61735 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd47Q61735 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd47Q61735 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cd47Q61735 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd47Q61735 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cd47Q61735 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd47Q61735 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.16□□□□□ -0.14
Cd47Q61735 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cd47Q61735 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Gm15794-201ENSMUST00000120182 631 ntBASIC14.16□□□□□ -0.14
Cd47Q61735 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cd47Q61735 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Cd47Q61735 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.16□□□□□ -0.14
Cd47Q61735 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
Cd47Q61735 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd47Q61735 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cd47Q61735 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Cd47Q61735 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd47Q61735 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd47Q61735 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.15□□□□□ -0.14
Cd47Q61735 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd47Q61735 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd47Q61735 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cd47Q61735 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Cd47Q61735 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cd47Q61735 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.15□□□□□ -0.14
Cd47Q61735 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd47Q61735 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cd47Q61735 AA414768-201ENSMUST00000121924 1257 ntBASIC14.15□□□□□ -0.14
Cd47Q61735 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.15□□□□□ -0.14
Cd47Q61735 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd47Q61735 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cd47Q61735 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.15□□□□□ -0.14
Cd47Q61735 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd47Q61735 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Cd47Q61735 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd47Q61735 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd47Q61735 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd47Q61735 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd47Q61735 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd47Q61735 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd47Q61735 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cd47Q61735 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Cd47Q61735 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cd47Q61735 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cd47Q61735 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.15□□□□□ -0.15
Cd47Q61735 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Cd47Q61735 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cd47Q61735 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd47Q61735 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd47Q61735 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd47Q61735 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd47Q61735 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cd47Q61735 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd47Q61735 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cd47Q61735 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd47Q61735 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd47Q61735 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cd47Q61735 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.14□□□□□ -0.15
Cd47Q61735 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd47Q61735 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Cd47Q61735 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.14□□□□□ -0.15
Cd47Q61735 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.14□□□□□ -0.15
Cd47Q61735 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cd47Q61735 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms