Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ecm1Q61508 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.12■□□□□ 0.33
Ecm1Q61508 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.12■□□□□ 0.33
Ecm1Q61508 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.12■□□□□ 0.33
Ecm1Q61508 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ecm1Q61508 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ecm1Q61508 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ecm1Q61508 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ecm1Q61508 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ecm1Q61508 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ecm1Q61508 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.12■□□□□ 0.33
Ecm1Q61508 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ecm1Q61508 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ecm1Q61508 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ecm1Q61508 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.12■□□□□ 0.33
Ecm1Q61508 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ecm1Q61508 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ecm1Q61508 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ecm1Q61508 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.11■□□□□ 0.33
Ecm1Q61508 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ecm1Q61508 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ecm1Q61508 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ecm1Q61508 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ecm1Q61508 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ecm1Q61508 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.11■□□□□ 0.33
Ecm1Q61508 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ecm1Q61508 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ecm1Q61508 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ecm1Q61508 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ecm1Q61508 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.11■□□□□ 0.33
Ecm1Q61508 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ecm1Q61508 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.11■□□□□ 0.33
Ecm1Q61508 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.11■□□□□ 0.33
Ecm1Q61508 Gm5779-201ENSMUST00000218467 910 ntBASIC17.11■□□□□ 0.33
Ecm1Q61508 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ecm1Q61508 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ecm1Q61508 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ecm1Q61508 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ecm1Q61508 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.11■□□□□ 0.33
Ecm1Q61508 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ecm1Q61508 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.1■□□□□ 0.33
Ecm1Q61508 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ecm1Q61508 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ecm1Q61508 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ecm1Q61508 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ecm1Q61508 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ecm1Q61508 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ecm1Q61508 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ecm1Q61508 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.1■□□□□ 0.33
Ecm1Q61508 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.1■□□□□ 0.33
Ecm1Q61508 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ecm1Q61508 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ecm1Q61508 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ecm1Q61508 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ecm1Q61508 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ecm1Q61508 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ecm1Q61508 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ecm1Q61508 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.1■□□□□ 0.33
Ecm1Q61508 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ecm1Q61508 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ecm1Q61508 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ecm1Q61508 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.1■□□□□ 0.33
Ecm1Q61508 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Ecm1Q61508 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ecm1Q61508 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.09■□□□□ 0.33
Ecm1Q61508 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ecm1Q61508 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ecm1Q61508 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ecm1Q61508 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
Ecm1Q61508 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ecm1Q61508 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ecm1Q61508 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ecm1Q61508 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.09■□□□□ 0.33
Ecm1Q61508 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ecm1Q61508 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ecm1Q61508 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.09■□□□□ 0.33
Ecm1Q61508 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ecm1Q61508 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Ecm1Q61508 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.09■□□□□ 0.33
Ecm1Q61508 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ecm1Q61508 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ecm1Q61508 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ecm1Q61508 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ecm1Q61508 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ecm1Q61508 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ecm1Q61508 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ecm1Q61508 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ecm1Q61508 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ecm1Q61508 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ecm1Q61508 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.08■□□□□ 0.32
Ecm1Q61508 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ecm1Q61508 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ecm1Q61508 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ecm1Q61508 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.08■□□□□ 0.32
Ecm1Q61508 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ecm1Q61508 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.08■□□□□ 0.32
Ecm1Q61508 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.08■□□□□ 0.32
Ecm1Q61508 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.08■□□□□ 0.32
Ecm1Q61508 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ecm1Q61508 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms