Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Itm2aQ61500 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Itm2aQ61500 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Itm2aQ61500 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Itm2aQ61500 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Itm2aQ61500 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Itm2aQ61500 Gm7367-201ENSMUST00000057611 492 ntBASIC15.3■□□□□ 0.04
Itm2aQ61500 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Itm2aQ61500 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Itm2aQ61500 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Itm2aQ61500 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Itm2aQ61500 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.29■□□□□ 0.04
Itm2aQ61500 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Itm2aQ61500 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.29■□□□□ 0.04
Itm2aQ61500 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.29■□□□□ 0.04
Itm2aQ61500 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.29■□□□□ 0.04
Itm2aQ61500 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
Itm2aQ61500 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Itm2aQ61500 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Itm2aQ61500 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.28■□□□□ 0.04
Itm2aQ61500 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Itm2aQ61500 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Itm2aQ61500 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Itm2aQ61500 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Itm2aQ61500 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Itm2aQ61500 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Itm2aQ61500 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Itm2aQ61500 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.28■□□□□ 0.04
Itm2aQ61500 Gm27389-201ENSMUST00000183622 195 ntBASIC15.28■□□□□ 0.04
Itm2aQ61500 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Itm2aQ61500 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Itm2aQ61500 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Itm2aQ61500 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Itm2aQ61500 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Itm2aQ61500 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Itm2aQ61500 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Itm2aQ61500 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.28■□□□□ 0.04
Itm2aQ61500 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Itm2aQ61500 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Itm2aQ61500 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Itm2aQ61500 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Itm2aQ61500 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Itm2aQ61500 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.27■□□□□ 0.04
Itm2aQ61500 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Itm2aQ61500 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Itm2aQ61500 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Itm2aQ61500 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.27■□□□□ 0.04
Itm2aQ61500 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.27■□□□□ 0.04
Itm2aQ61500 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.27■□□□□ 0.04
Itm2aQ61500 Gm43799-201ENSMUST00000201845 579 ntBASIC15.27■□□□□ 0.04
Itm2aQ61500 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Itm2aQ61500 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Itm2aQ61500 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Itm2aQ61500 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Itm2aQ61500 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Itm2aQ61500 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Itm2aQ61500 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Itm2aQ61500 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Itm2aQ61500 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Itm2aQ61500 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Itm2aQ61500 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Itm2aQ61500 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Itm2aQ61500 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Itm2aQ61500 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Itm2aQ61500 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Itm2aQ61500 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Itm2aQ61500 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Itm2aQ61500 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Itm2aQ61500 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Itm2aQ61500 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
Itm2aQ61500 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Itm2aQ61500 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.26■□□□□ 0.03
Itm2aQ61500 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Itm2aQ61500 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Itm2aQ61500 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Itm2aQ61500 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Itm2aQ61500 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Itm2aQ61500 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.26■□□□□ 0.03
Itm2aQ61500 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Itm2aQ61500 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Itm2aQ61500 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms