Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm29269-201ENSMUST00000190087 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm21722-201ENSMUST00000190153 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm28423-201ENSMUST00000190701 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm21899-201ENSMUST00000190745 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm21910-201ENSMUST00000191163 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm21849-201ENSMUST00000191571 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm28678-201ENSMUST00000191593 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm20910-201ENSMUST00000193268 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm21871-201ENSMUST00000194621 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a1Q61245 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a1Q61245 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a1Q61245 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a1Q61245 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a1Q61245 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a1Q61245 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a1Q61245 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a1Q61245 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Col11a1Q61245 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a1Q61245 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a1Q61245 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.18■□□□□ 0.34
Col11a1Q61245 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a1Q61245 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC17.18■□□□□ 0.34
Col11a1Q61245 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Col11a1Q61245 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a1Q61245 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.18■□□□□ 0.34
Col11a1Q61245 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.18■□□□□ 0.34
Col11a1Q61245 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a1Q61245 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Col11a1Q61245 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a1Q61245 Gm5566-201ENSMUST00000116118 459 ntBASIC17.17■□□□□ 0.34
Col11a1Q61245 Gm6745-201ENSMUST00000199216 526 ntBASIC17.17■□□□□ 0.34
Col11a1Q61245 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a1Q61245 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a1Q61245 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Col11a1Q61245 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Col11a1Q61245 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Col11a1Q61245 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.17■□□□□ 0.34
Col11a1Q61245 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Col11a1Q61245 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a1Q61245 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a1Q61245 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a1Q61245 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a1Q61245 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Col11a1Q61245 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.17■□□□□ 0.34
Col11a1Q61245 Mir7085-201ENSMUST00000184353 66 ntBASIC17.17■□□□□ 0.34
Col11a1Q61245 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Col11a1Q61245 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Col11a1Q61245 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.16■□□□□ 0.34
Col11a1Q61245 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.16■□□□□ 0.34
Col11a1Q61245 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a1Q61245 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.16■□□□□ 0.34
Col11a1Q61245 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.16■□□□□ 0.34
Col11a1Q61245 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Col11a1Q61245 Gm44719-201ENSMUST00000206404 149 ntBASIC17.16■□□□□ 0.34
Col11a1Q61245 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a1Q61245 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.16■□□□□ 0.34
Col11a1Q61245 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a1Q61245 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Col11a1Q61245 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Col11a1Q61245 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.16■□□□□ 0.34
Col11a1Q61245 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a1Q61245 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a1Q61245 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a1Q61245 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a1Q61245 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a1Q61245 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a1Q61245 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a1Q61245 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a1Q61245 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a1Q61245 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.15■□□□□ 0.34
Col11a1Q61245 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a1Q61245 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a1Q61245 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a1Q61245 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a1Q61245 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a1Q61245 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.15■□□□□ 0.34
Col11a1Q61245 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a1Q61245 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a1Q61245 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a1Q61245 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col11a1Q61245 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Col11a1Q61245 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.14■□□□□ 0.34
Col11a1Q61245 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col11a1Q61245 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col11a1Q61245 Gm9899-201ENSMUST00000065519 555 ntBASIC17.14■□□□□ 0.34
Col11a1Q61245 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a1Q61245 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a1Q61245 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.14■□□□□ 0.33
Col11a1Q61245 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a1Q61245 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a1Q61245 Gm18018-201ENSMUST00000198273 408 ntBASIC17.14■□□□□ 0.33
Col11a1Q61245 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a1Q61245 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a1Q61245 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Col11a1Q61245 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a1Q61245 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a1Q61245 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col11a1Q61245 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms