Protein–RNA interactions for Protein: Q60949

Tbc1d1, TBC1 domain family member 1, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbc1d1Q60949 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tbc1d1Q60949 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tbc1d1Q60949 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Gm11025-201ENSMUST00000140773 466 ntBASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tbc1d1Q60949 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Mir8117-201ENSMUST00000184773 107 ntBASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tbc1d1Q60949 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tbc1d1Q60949 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tbc1d1Q60949 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Tbc1d1Q60949 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tbc1d1Q60949 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tbc1d1Q60949 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Tbc1d1Q60949 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tbc1d1Q60949 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Tbc1d1Q60949 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tbc1d1Q60949 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tbc1d1Q60949 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tbc1d1Q60949 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tbc1d1Q60949 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tbc1d1Q60949 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tbc1d1Q60949 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tbc1d1Q60949 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tbc1d1Q60949 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tbc1d1Q60949 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tbc1d1Q60949 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.76■□□□□ 0.27
Tbc1d1Q60949 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.76■□□□□ 0.27
Tbc1d1Q60949 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.76■□□□□ 0.27
Tbc1d1Q60949 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tbc1d1Q60949 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tbc1d1Q60949 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tbc1d1Q60949 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tbc1d1Q60949 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tbc1d1Q60949 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.75■□□□□ 0.27
Tbc1d1Q60949 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms