Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shroom1Q5SX79 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.52■□□□□ 0.23
Shroom1Q5SX79 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Shroom1Q5SX79 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Shroom1Q5SX79 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shroom1Q5SX79 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shroom1Q5SX79 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shroom1Q5SX79 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Gm25911-201ENSMUST00000157621 56 ntBASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Gm6257-201ENSMUST00000163864 910 ntBASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom1Q5SX79 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom1Q5SX79 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom1Q5SX79 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom1Q5SX79 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom1Q5SX79 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom1Q5SX79 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.49■□□□□ 0.23
Shroom1Q5SX79 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom1Q5SX79 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom1Q5SX79 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom1Q5SX79 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Shroom1Q5SX79 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom1Q5SX79 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom1Q5SX79 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom1Q5SX79 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Shroom1Q5SX79 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.48■□□□□ 0.23
Shroom1Q5SX79 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom1Q5SX79 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms