Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav2Q5R1I9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Gm27628-201ENSMUST00000184911 107 ntBASIC12.39□□□□□ -0.43
Trav2Q5R1I9 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Gm7787-201ENSMUST00000216858 688 ntBASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav2Q5R1I9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Gm27525-201ENSMUST00000184465 107 ntBASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.38□□□□□ -0.43
Trav2Q5R1I9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav2Q5R1I9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms