Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-2Q5R1I4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Gm14722-201ENSMUST00000118943 689 ntBASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Gm44872-201ENSMUST00000207864 420 ntBASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.59□□□□□ -0.23
Trav6-2Q5R1I4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trav6-2Q5R1I4 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.58□□□□□ -0.23
Trav6-2Q5R1I4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Gm12008-201ENSMUST00000117791 755 ntBASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Auts2-212ENSMUST00000178555 309 ntBASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Gm8318-201ENSMUST00000182954 872 ntBASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Gm45612-201ENSMUST00000211320 160 ntBASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-2Q5R1I4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms