Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm2274-201ENSMUST00000184539 609 ntBASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.08□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms