Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8d-2Q5R1B6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.07■□□□□ 0
Trav8d-2Q5R1B6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Gm43767-201ENSMUST00000198933 381 ntBASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.06■□□□□ 0
Trav8d-2Q5R1B6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav8d-2Q5R1B6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav8d-2Q5R1B6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav8d-2Q5R1B6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav8d-2Q5R1B6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav8d-2Q5R1B6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav8d-2Q5R1B6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Gm2423-201ENSMUST00000074863 733 ntBASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav8d-2Q5R1B6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Gm6888-201ENSMUST00000221983 706 ntBASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-2Q5R1B6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.03■□□□□ -0
Trav8d-2Q5R1B6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms