Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 Gm15678-201ENSMUST00000117573 960 ntBASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col27a1Q5QNQ9 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Mir1897-201ENSMUST00000122581 272 ntBASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Gm5479-201ENSMUST00000160578 435 ntBASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Gm37917-201ENSMUST00000194711 392 ntBASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.78□□□□□ -0.04
Col27a1Q5QNQ9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col27a1Q5QNQ9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col27a1Q5QNQ9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col27a1Q5QNQ9 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.77□□□□□ -0.04
Col27a1Q5QNQ9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Col27a1Q5QNQ9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.77□□□□□ -0.04
Col27a1Q5QNQ9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col27a1Q5QNQ9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col27a1Q5QNQ9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.77□□□□□ -0.04
Col27a1Q5QNQ9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col27a1Q5QNQ9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.77□□□□□ -0.04
Col27a1Q5QNQ9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col27a1Q5QNQ9 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.77□□□□□ -0.05
Col27a1Q5QNQ9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col27a1Q5QNQ9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Col27a1Q5QNQ9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
Col27a1Q5QNQ9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col27a1Q5QNQ9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col27a1Q5QNQ9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col27a1Q5QNQ9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col27a1Q5QNQ9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.77□□□□□ -0.05
Col27a1Q5QNQ9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col27a1Q5QNQ9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col27a1Q5QNQ9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col27a1Q5QNQ9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col27a1Q5QNQ9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col27a1Q5QNQ9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col27a1Q5QNQ9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col27a1Q5QNQ9 Gm11425-201ENSMUST00000119608 498 ntBASIC14.76□□□□□ -0.05
Col27a1Q5QNQ9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col27a1Q5QNQ9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.76□□□□□ -0.05
Col27a1Q5QNQ9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms