Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Gm37444-201ENSMUST00000193605 439 ntBASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Gm44492-201ENSMUST00000197012 141 ntBASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Gm18246-201ENSMUST00000221023 728 ntBASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h1Q4VGL6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rc3h1Q4VGL6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.89■□□□□ 0.46
Rc3h1Q4VGL6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rc3h1Q4VGL6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Rc3h1Q4VGL6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Gm14722-201ENSMUST00000118943 689 ntBASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Gm6736-201ENSMUST00000166583 948 ntBASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Rc3h1Q4VGL6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 Gm45747-201ENSMUST00000212203 999 ntBASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h1Q4VGL6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h1Q4VGL6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h1Q4VGL6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h1Q4VGL6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h1Q4VGL6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Rc3h1Q4VGL6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h1Q4VGL6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms