Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc2Q4U2R1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC9.1□□□□□ -0.95
Herc2Q4U2R1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Herc2Q4U2R1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Herc2Q4U2R1 Gm7820-201ENSMUST00000121012 1052 ntBASIC9.1□□□□□ -0.95
Herc2Q4U2R1 Gm22334-201ENSMUST00000158070 133 ntBASIC9.1□□□□□ -0.95
Herc2Q4U2R1 Gm38158-201ENSMUST00000194617 339 ntBASIC9.1□□□□□ -0.95
Herc2Q4U2R1 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc2Q4U2R1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC9.1□□□□□ -0.95
Herc2Q4U2R1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Herc2Q4U2R1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc2Q4U2R1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc2Q4U2R1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc2Q4U2R1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc2Q4U2R1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Herc2Q4U2R1 Gm12997-201ENSMUST00000120207 640 ntBASIC9.1□□□□□ -0.95
Herc2Q4U2R1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC9.1□□□□□ -0.95
Herc2Q4U2R1 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc2Q4U2R1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Haglr-201ENSMUST00000100000 2085 ntBASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC9.09□□□□□ -0.95
Herc2Q4U2R1 Gm12384-201ENSMUST00000119228 919 ntBASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Gm27501-201ENSMUST00000183599 107 ntBASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 AC113441.2-201ENSMUST00000221538 1468 ntBASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc2Q4U2R1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 AC107711.5-202ENSMUST00000226429 702 ntBASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Zscan30-202ENSMUST00000224144 1458 ntBASIC9.07□□□□□ -0.96
Herc2Q4U2R1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Gm8775-201ENSMUST00000170943 1327 ntBASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Gm8463-201ENSMUST00000208573 613 ntBASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Gm7993-201ENSMUST00000200970 1384 ntBASIC9.07□□□□□ -0.96
Herc2Q4U2R1 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Gm9445-201ENSMUST00000207454 1285 ntBASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms