Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SfswapQ3USH5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SfswapQ3USH5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SfswapQ3USH5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SfswapQ3USH5 Gm13597-201ENSMUST00000121239 375 ntBASIC18.48■□□□□ 0.55
SfswapQ3USH5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.48■□□□□ 0.55
SfswapQ3USH5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SfswapQ3USH5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SfswapQ3USH5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SfswapQ3USH5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SfswapQ3USH5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.48■□□□□ 0.55
SfswapQ3USH5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SfswapQ3USH5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SfswapQ3USH5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SfswapQ3USH5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SfswapQ3USH5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.47■□□□□ 0.55
SfswapQ3USH5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SfswapQ3USH5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SfswapQ3USH5 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.47■□□□□ 0.55
SfswapQ3USH5 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SfswapQ3USH5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SfswapQ3USH5 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SfswapQ3USH5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SfswapQ3USH5 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SfswapQ3USH5 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SfswapQ3USH5 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.47■□□□□ 0.55
SfswapQ3USH5 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SfswapQ3USH5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SfswapQ3USH5 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SfswapQ3USH5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SfswapQ3USH5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SfswapQ3USH5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.47■□□□□ 0.55
SfswapQ3USH5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SfswapQ3USH5 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SfswapQ3USH5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SfswapQ3USH5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SfswapQ3USH5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SfswapQ3USH5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SfswapQ3USH5 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.46■□□□□ 0.55
SfswapQ3USH5 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SfswapQ3USH5 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.46■□□□□ 0.55
SfswapQ3USH5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SfswapQ3USH5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SfswapQ3USH5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SfswapQ3USH5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SfswapQ3USH5 Gm25925-201ENSMUST00000158314 306 ntBASIC18.46■□□□□ 0.55
SfswapQ3USH5 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.46■□□□□ 0.55
SfswapQ3USH5 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.46■□□□□ 0.55
SfswapQ3USH5 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.46■□□□□ 0.55
SfswapQ3USH5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SfswapQ3USH5 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SfswapQ3USH5 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.46■□□□□ 0.55
SfswapQ3USH5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SfswapQ3USH5 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SfswapQ3USH5 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SfswapQ3USH5 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SfswapQ3USH5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SfswapQ3USH5 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SfswapQ3USH5 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SfswapQ3USH5 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.46■□□□□ 0.54
SfswapQ3USH5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SfswapQ3USH5 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
SfswapQ3USH5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.45■□□□□ 0.54
SfswapQ3USH5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
SfswapQ3USH5 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Gm17271-201ENSMUST00000165535 355 ntBASIC18.45■□□□□ 0.54
SfswapQ3USH5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.45■□□□□ 0.54
SfswapQ3USH5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.45■□□□□ 0.54
SfswapQ3USH5 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SfswapQ3USH5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SfswapQ3USH5 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SfswapQ3USH5 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.44■□□□□ 0.54
SfswapQ3USH5 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SfswapQ3USH5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SfswapQ3USH5 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SfswapQ3USH5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SfswapQ3USH5 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SfswapQ3USH5 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SfswapQ3USH5 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
SfswapQ3USH5 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SfswapQ3USH5 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
SfswapQ3USH5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms