Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Ccdc190Q3URK1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Ccdc190Q3URK1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc190Q3URK1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc190Q3URK1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc190Q3URK1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc190Q3URK1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Gm44450-201ENSMUST00000199528 114 ntBASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ccdc190Q3URK1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms