Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.34■□□□□ 0.21
Nlrc4Q3UP24 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Nlrc4Q3UP24 Gm15590-201ENSMUST00000078419 552 ntBASIC16.34■□□□□ 0.21
Nlrc4Q3UP24 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nlrc4Q3UP24 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nlrc4Q3UP24 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nlrc4Q3UP24 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.34■□□□□ 0.21
Nlrc4Q3UP24 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.34■□□□□ 0.21
Nlrc4Q3UP24 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nlrc4Q3UP24 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nlrc4Q3UP24 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nlrc4Q3UP24 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Nlrc4Q3UP24 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nlrc4Q3UP24 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nlrc4Q3UP24 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nlrc4Q3UP24 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nlrc4Q3UP24 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nlrc4Q3UP24 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
Nlrc4Q3UP24 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nlrc4Q3UP24 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Gm14722-201ENSMUST00000118943 689 ntBASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Gm37153-201ENSMUST00000193637 231 ntBASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nlrc4Q3UP24 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nlrc4Q3UP24 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Gm11764-201ENSMUST00000120221 623 ntBASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Gm27628-201ENSMUST00000184911 107 ntBASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Gm44771-201ENSMUST00000206975 626 ntBASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nlrc4Q3UP24 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.3■□□□□ 0.2
Nlrc4Q3UP24 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms