Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Gm12821-201ENSMUST00000120022 600 ntBASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1brtQ3UNC9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Mtag2-201ENSMUST00000058665 714 ntBASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Gm13241-201ENSMUST00000094493 780 ntBASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1brtQ3UNC9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Gm11927-201ENSMUST00000118472 759 ntBASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Gm44549-201ENSMUST00000208351 577 ntBASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Gm7514-201ENSMUST00000209475 934 ntBASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms