Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf44Q3UHJ8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf44Q3UHJ8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf44Q3UHJ8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf44Q3UHJ8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf44Q3UHJ8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf44Q3UHJ8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf44Q3UHJ8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf44Q3UHJ8 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.99□□□□□ -0.01
Rnf44Q3UHJ8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf44Q3UHJ8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf44Q3UHJ8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf44Q3UHJ8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf44Q3UHJ8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.98□□□□□ -0.01
Rnf44Q3UHJ8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf44Q3UHJ8 Gm18195-201ENSMUST00000207604 706 ntBASIC14.98□□□□□ -0.01
Rnf44Q3UHJ8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.98□□□□□ -0.01
Rnf44Q3UHJ8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.98□□□□□ -0.01
Rnf44Q3UHJ8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf44Q3UHJ8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf44Q3UHJ8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf44Q3UHJ8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf44Q3UHJ8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf44Q3UHJ8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rnf44Q3UHJ8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf44Q3UHJ8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Gm15173-201ENSMUST00000122049 433 ntBASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Mzt1-203ENSMUST00000227948 952 ntBASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Rnf44Q3UHJ8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Rnf44Q3UHJ8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf44Q3UHJ8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf44Q3UHJ8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf44Q3UHJ8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf44Q3UHJ8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf44Q3UHJ8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf44Q3UHJ8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf44Q3UHJ8 Gm7222-201ENSMUST00000117512 906 ntBASIC14.96□□□□□ -0.01
Rnf44Q3UHJ8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rnf44Q3UHJ8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf44Q3UHJ8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf44Q3UHJ8 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.96□□□□□ -0.01
Rnf44Q3UHJ8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf44Q3UHJ8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf44Q3UHJ8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf44Q3UHJ8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.96□□□□□ -0.01
Rnf44Q3UHJ8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf44Q3UHJ8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf44Q3UHJ8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf44Q3UHJ8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf44Q3UHJ8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Rnf44Q3UHJ8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 Gm6550-201ENSMUST00000187574 993 ntBASIC14.95□□□□□ -0.02
Rnf44Q3UHJ8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms