Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Limch1Q3UH68 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.25■□□□□ 0.51
Limch1Q3UH68 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Limch1Q3UH68 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Limch1Q3UH68 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Limch1Q3UH68 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Limch1Q3UH68 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Limch1Q3UH68 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Limch1Q3UH68 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Limch1Q3UH68 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Limch1Q3UH68 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Limch1Q3UH68 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Limch1Q3UH68 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.24■□□□□ 0.51
Limch1Q3UH68 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Limch1Q3UH68 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limch1Q3UH68 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Limch1Q3UH68 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.23■□□□□ 0.51
Limch1Q3UH68 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.23■□□□□ 0.51
Limch1Q3UH68 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limch1Q3UH68 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.22■□□□□ 0.51
Limch1Q3UH68 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.22■□□□□ 0.51
Limch1Q3UH68 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.22■□□□□ 0.51
Limch1Q3UH68 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.22■□□□□ 0.51
Limch1Q3UH68 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.22■□□□□ 0.51
Limch1Q3UH68 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.22■□□□□ 0.51
Limch1Q3UH68 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.22■□□□□ 0.51
Limch1Q3UH68 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.22■□□□□ 0.51
Limch1Q3UH68 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.22■□□□□ 0.51
Limch1Q3UH68 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms