Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ptchd3Q0EEE2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ptchd3Q0EEE2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Ptchd3Q0EEE2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ptchd3Q0EEE2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ptchd3Q0EEE2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ptchd3Q0EEE2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ptchd3Q0EEE2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ptchd3Q0EEE2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ptchd3Q0EEE2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ptchd3Q0EEE2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ptchd3Q0EEE2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Ptchd3Q0EEE2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ptchd3Q0EEE2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ptchd3Q0EEE2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ptchd3Q0EEE2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ptchd3Q0EEE2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ptchd3Q0EEE2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ptchd3Q0EEE2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ptchd3Q0EEE2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ptchd3Q0EEE2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ptchd3Q0EEE2 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.02■□□□□ -0
Ptchd3Q0EEE2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Ptchd3Q0EEE2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ptchd3Q0EEE2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ptchd3Q0EEE2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ptchd3Q0EEE2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ptchd3Q0EEE2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.02■□□□□ -0
Ptchd3Q0EEE2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ptchd3Q0EEE2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ptchd3Q0EEE2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ptchd3Q0EEE2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ptchd3Q0EEE2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ptchd3Q0EEE2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ptchd3Q0EEE2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ptchd3Q0EEE2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Ptchd3Q0EEE2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Ptchd3Q0EEE2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ptchd3Q0EEE2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ptchd3Q0EEE2 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms