Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf1Q07802 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.71■□□□□ 0.11
Ebf1Q07802 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.71■□□□□ 0.11
Ebf1Q07802 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf1Q07802 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ebf1Q07802 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf1Q07802 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf1Q07802 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.71■□□□□ 0.11
Ebf1Q07802 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf1Q07802 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf1Q07802 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf1Q07802 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ebf1Q07802 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ebf1Q07802 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ebf1Q07802 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ebf1Q07802 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ebf1Q07802 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.71■□□□□ 0.1
Ebf1Q07802 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ebf1Q07802 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Ebf1Q07802 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ebf1Q07802 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ebf1Q07802 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Ebf1Q07802 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Gm27300-201ENSMUST00000184085 97 ntBASIC15.7■□□□□ 0.1
Ebf1Q07802 Gm27335-201ENSMUST00000184758 97 ntBASIC15.7■□□□□ 0.1
Ebf1Q07802 Gm45167-201ENSMUST00000208007 322 ntBASIC15.7■□□□□ 0.1
Ebf1Q07802 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.7■□□□□ 0.1
Ebf1Q07802 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ebf1Q07802 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf1Q07802 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.69■□□□□ 0.1
Ebf1Q07802 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ebf1Q07802 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.69■□□□□ 0.1
Ebf1Q07802 Gm8344-201ENSMUST00000119813 856 ntBASIC15.69■□□□□ 0.1
Ebf1Q07802 Gm17271-201ENSMUST00000165535 355 ntBASIC15.69■□□□□ 0.1
Ebf1Q07802 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.69■□□□□ 0.1
Ebf1Q07802 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.69■□□□□ 0.1
Ebf1Q07802 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Ebf1Q07802 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.69■□□□□ 0.1
Ebf1Q07802 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf1Q07802 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ebf1Q07802 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf1Q07802 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ebf1Q07802 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf1Q07802 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf1Q07802 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf1Q07802 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ebf1Q07802 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf1Q07802 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf1Q07802 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf1Q07802 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ebf1Q07802 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.68■□□□□ 0.1
Ebf1Q07802 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.68■□□□□ 0.1
Ebf1Q07802 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.68■□□□□ 0.1
Ebf1Q07802 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf1Q07802 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf1Q07802 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf1Q07802 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf1Q07802 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf1Q07802 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf1Q07802 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.68■□□□□ 0.1
Ebf1Q07802 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf1Q07802 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf1Q07802 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Ebf1Q07802 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms