Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.66□□□□□ -0.06
Nkx3-2P97503 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx3-2P97503 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.65□□□□□ -0.06
Nkx3-2P97503 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Gm13036-201ENSMUST00000117799 748 ntBASIC14.65□□□□□ -0.06
Nkx3-2P97503 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx3-2P97503 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx3-2P97503 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
Nkx3-2P97503 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Gm8344-201ENSMUST00000119813 856 ntBASIC14.64□□□□□ -0.07
Nkx3-2P97503 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Gm5364-201ENSMUST00000216789 889 ntBASIC14.64□□□□□ -0.07
Nkx3-2P97503 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.64□□□□□ -0.07
Nkx3-2P97503 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx3-2P97503 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.63□□□□□ -0.07
Nkx3-2P97503 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.63□□□□□ -0.07
Nkx3-2P97503 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx3-2P97503 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms