Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm25649-201ENSMUST00000178476 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm25548-201ENSMUST00000178681 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm23147-201ENSMUST00000178841 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm26095-201ENSMUST00000179270 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm22171-201ENSMUST00000179283 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm23936-201ENSMUST00000179354 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm22619-201ENSMUST00000179516 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm25255-201ENSMUST00000179579 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm24755-201ENSMUST00000179691 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm26506-201ENSMUST00000179692 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm25086-201ENSMUST00000179931 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm23243-201ENSMUST00000180047 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm24659-201ENSMUST00000180212 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm24169-201ENSMUST00000180244 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm23689-201ENSMUST00000180354 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm27359-201ENSMUST00000184153 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm27785-201ENSMUST00000184268 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm27466-201ENSMUST00000184396 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm27703-201ENSMUST00000184836 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.3□□□□□ -0.12
Cacna1aP97445 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1aP97445 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1aP97445 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1aP97445 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1aP97445 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cacna1aP97445 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1aP97445 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1aP97445 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1aP97445 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1aP97445 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.29□□□□□ -0.12
Cacna1aP97445 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cacna1aP97445 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cacna1aP97445 Gm19164-201ENSMUST00000210667 640 ntBASIC14.29□□□□□ -0.12
Cacna1aP97445 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cacna1aP97445 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cacna1aP97445 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1aP97445 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1aP97445 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.29□□□□□ -0.12
Cacna1aP97445 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cacna1aP97445 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Cacna1aP97445 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1aP97445 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1aP97445 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1aP97445 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1aP97445 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1aP97445 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1aP97445 Gm12008-201ENSMUST00000117791 755 ntBASIC14.29□□□□□ -0.12
Cacna1aP97445 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.29□□□□□ -0.12
Cacna1aP97445 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cacna1aP97445 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.29□□□□□ -0.12
Cacna1aP97445 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1aP97445 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.28□□□□□ -0.12
Cacna1aP97445 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1aP97445 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1aP97445 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1aP97445 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1aP97445 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1aP97445 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cacna1aP97445 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1aP97445 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cacna1aP97445 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.28□□□□□ -0.12
Cacna1aP97445 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1aP97445 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1aP97445 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1aP97445 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.28□□□□□ -0.12
Cacna1aP97445 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1aP97445 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1aP97445 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.28□□□□□ -0.12
Cacna1aP97445 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Cacna1aP97445 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Cacna1aP97445 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1aP97445 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1aP97445 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cacna1aP97445 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.27□□□□□ -0.12
Cacna1aP97445 Gm43630-201ENSMUST00000201550 776 ntBASIC14.27□□□□□ -0.12
Cacna1aP97445 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Cacna1aP97445 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Cacna1aP97445 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cacna1aP97445 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cacna1aP97445 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cacna1aP97445 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1aP97445 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cacna1aP97445 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1aP97445 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cacna1aP97445 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1aP97445 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1aP97445 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.27□□□□□ -0.13
Cacna1aP97445 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1aP97445 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1aP97445 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1aP97445 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1aP97445 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1aP97445 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.27□□□□□ -0.13
Cacna1aP97445 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1aP97445 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1aP97445 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1aP97445 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1aP97445 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1aP97445 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1aP97445 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms