Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.81□□□□□ -0.36
Usp9xP70398 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Usp9xP70398 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Usp9xP70398 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.81□□□□□ -0.36
Usp9xP70398 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp9xP70398 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Usp9xP70398 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Gm9908-201ENSMUST00000211534 448 ntBASIC12.8□□□□□ -0.36
Usp9xP70398 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.8□□□□□ -0.36
Usp9xP70398 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Usp9xP70398 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Usp9xP70398 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.8□□□□□ -0.36
Usp9xP70398 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.8□□□□□ -0.36
Usp9xP70398 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp9xP70398 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.8□□□□□ -0.36
Usp9xP70398 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Gm23984-201ENSMUST00000157139 203 ntBASIC12.8□□□□□ -0.36
Usp9xP70398 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.8□□□□□ -0.36
Usp9xP70398 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.8□□□□□ -0.36
Usp9xP70398 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp9xP70398 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Usp9xP70398 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp9xP70398 Gm11425-201ENSMUST00000119608 498 ntBASIC12.79□□□□□ -0.36
Usp9xP70398 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp9xP70398 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp9xP70398 Gm9396-201ENSMUST00000076703 567 ntBASIC12.79□□□□□ -0.36
Usp9xP70398 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp9xP70398 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp9xP70398 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp9xP70398 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp9xP70398 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp9xP70398 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp9xP70398 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp9xP70398 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp9xP70398 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp9xP70398 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp9xP70398 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp9xP70398 Gm12859-201ENSMUST00000117834 427 ntBASIC12.79□□□□□ -0.36
Usp9xP70398 Gm11543-201ENSMUST00000120758 370 ntBASIC12.79□□□□□ -0.36
Usp9xP70398 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp9xP70398 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
Usp9xP70398 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp9xP70398 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp9xP70398 Gm29667-201ENSMUST00000190817 490 ntBASIC12.79□□□□□ -0.36
Usp9xP70398 Shd-206ENSMUST00000225145 998 ntBASIC12.79□□□□□ -0.36
Usp9xP70398 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Usp9xP70398 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp9xP70398 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp9xP70398 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp9xP70398 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp9xP70398 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Usp9xP70398 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp9xP70398 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp9xP70398 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp9xP70398 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Usp9xP70398 Gm27838-201ENSMUST00000184829 128 ntBASIC12.78□□□□□ -0.36
Usp9xP70398 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp9xP70398 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp9xP70398 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Usp9xP70398 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp9xP70398 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp9xP70398 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp9xP70398 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.78□□□□□ -0.36
Usp9xP70398 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp9xP70398 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp9xP70398 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp9xP70398 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Usp9xP70398 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp9xP70398 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.78□□□□□ -0.36
Usp9xP70398 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp9xP70398 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp9xP70398 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp9xP70398 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp9xP70398 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp9xP70398 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp9xP70398 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp9xP70398 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms