Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Gm8825-201ENSMUST00000182565 998 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Gm4518-201ENSMUST00000182638 718 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Gm27459-201ENSMUST00000184860 107 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.93□□□□□ -0.34
Pdlim4P70271 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pdlim4P70271 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pdlim4P70271 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pdlim4P70271 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Pdlim4P70271 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pdlim4P70271 Gm4459-201ENSMUST00000118750 468 ntBASIC12.92□□□□□ -0.34
Pdlim4P70271 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.92□□□□□ -0.34
Pdlim4P70271 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.92□□□□□ -0.34
Pdlim4P70271 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.92□□□□□ -0.34
Pdlim4P70271 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.92□□□□□ -0.34
Pdlim4P70271 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.92□□□□□ -0.34
Pdlim4P70271 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.92□□□□□ -0.34
Pdlim4P70271 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.92□□□□□ -0.34
Pdlim4P70271 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pdlim4P70271 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim4P70271 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pdlim4P70271 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim4P70271 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim4P70271 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pdlim4P70271 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim4P70271 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim4P70271 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim4P70271 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.91□□□□□ -0.34
Pdlim4P70271 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim4P70271 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim4P70271 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pdlim4P70271 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim4P70271 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.91□□□□□ -0.34
Pdlim4P70271 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.91□□□□□ -0.34
Pdlim4P70271 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.91□□□□□ -0.34
Pdlim4P70271 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.91□□□□□ -0.34
Pdlim4P70271 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim4P70271 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pdlim4P70271 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Pdlim4P70271 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.91□□□□□ -0.34
Pdlim4P70271 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim4P70271 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim4P70271 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim4P70271 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim4P70271 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pdlim4P70271 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim4P70271 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Pdlim4P70271 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim4P70271 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.9□□□□□ -0.34
Pdlim4P70271 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim4P70271 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms