Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Uba52P62984 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Uba52P62984 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Uba52P62984 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Uba52P62984 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Uba52P62984 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Uba52P62984 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Uba52P62984 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Uba52P62984 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.51□□□□□ -0.25
Uba52P62984 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.51□□□□□ -0.25
Uba52P62984 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.51□□□□□ -0.25
Uba52P62984 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.51□□□□□ -0.25
Uba52P62984 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Uba52P62984 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
Uba52P62984 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Uba52P62984 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Gm45328-201ENSMUST00000210942 917 ntBASIC13.51□□□□□ -0.25
Uba52P62984 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.51□□□□□ -0.25
Uba52P62984 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Uba52P62984 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.51□□□□□ -0.25
Uba52P62984 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Uba52P62984 Phf7-203ENSMUST00000226565 1971 ntBASIC13.51□□□□□ -0.25
Uba52P62984 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.5□□□□□ -0.25
Uba52P62984 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Uba52P62984 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
Uba52P62984 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Uba52P62984 Actl10-202ENSMUST00000226583 1501 ntBASIC13.5□□□□□ -0.25
Uba52P62984 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.5□□□□□ -0.25
Uba52P62984 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Gm24589-201ENSMUST00000116692 94 ntBASIC13.5□□□□□ -0.25
Uba52P62984 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.5□□□□□ -0.25
Uba52P62984 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.5□□□□□ -0.25
Uba52P62984 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Uba52P62984 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.5□□□□□ -0.25
Uba52P62984 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Uba52P62984 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Uba52P62984 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Uba52P62984 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba52P62984 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Uba52P62984 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Uba52P62984 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Uba52P62984 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Uba52P62984 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Uba52P62984 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Uba52P62984 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Uba52P62984 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Uba52P62984 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.49□□□□□ -0.25
Uba52P62984 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms