Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lsm5P62322 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Lsm5P62322 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Gm18421-201ENSMUST00000204122 625 ntBASIC12.98□□□□□ -0.33
Lsm5P62322 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Lsm5P62322 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.98□□□□□ -0.33
Lsm5P62322 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lsm5P62322 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.97□□□□□ -0.33
Lsm5P62322 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.97□□□□□ -0.33
Lsm5P62322 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.97□□□□□ -0.33
Lsm5P62322 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Lsm5P62322 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lsm5P62322 Gm44450-201ENSMUST00000199528 114 ntBASIC12.97□□□□□ -0.33
Lsm5P62322 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lsm5P62322 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Lsm5P62322 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm5P62322 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Lsm5P62322 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm5P62322 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm5P62322 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm5P62322 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm5P62322 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm5P62322 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm5P62322 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm5P62322 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm5P62322 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm5P62322 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm5P62322 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm5P62322 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm5P62322 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Lsm5P62322 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm5P62322 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm5P62322 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lsm5P62322 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm5P62322 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm5P62322 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm5P62322 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.96□□□□□ -0.33
Lsm5P62322 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm5P62322 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm5P62322 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm5P62322 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm5P62322 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm5P62322 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.96□□□□□ -0.34
Lsm5P62322 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm5P62322 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm5P62322 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm5P62322 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Lsm5P62322 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm5P62322 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm5P62322 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm5P62322 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm5P62322 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Lsm5P62322 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm5P62322 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.95□□□□□ -0.34
Lsm5P62322 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm5P62322 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm5P62322 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm5P62322 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm5P62322 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.95□□□□□ -0.34
Lsm5P62322 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.95□□□□□ -0.34
Lsm5P62322 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.95□□□□□ -0.34
Lsm5P62322 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.95□□□□□ -0.34
Lsm5P62322 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.95□□□□□ -0.34
Lsm5P62322 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm5P62322 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.95□□□□□ -0.34
Lsm5P62322 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lsm5P62322 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms