Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Lsm6P62313 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Lsm6P62313 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Lsm6P62313 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm6P62313 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm6P62313 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Lsm6P62313 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm6P62313 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm6P62313 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm6P62313 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm6P62313 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm6P62313 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm6P62313 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.61□□□□□ -0.23
Lsm6P62313 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.61□□□□□ -0.23
Lsm6P62313 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm6P62313 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.61□□□□□ -0.23
Lsm6P62313 Ank2-226ENSMUST00000189368 339 ntBASIC13.61□□□□□ -0.23
Lsm6P62313 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.61□□□□□ -0.23
Lsm6P62313 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm6P62313 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.61□□□□□ -0.23
Lsm6P62313 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Lsm6P62313 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm6P62313 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm6P62313 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Lsm6P62313 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm6P62313 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Lsm6P62313 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm6P62313 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Lsm6P62313 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm6P62313 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Lsm6P62313 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm6P62313 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.61□□□□□ -0.23
Lsm6P62313 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Lsm6P62313 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Lsm6P62313 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Lsm6P62313 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Lsm6P62313 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.6□□□□□ -0.23
Lsm6P62313 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.6□□□□□ -0.23
Lsm6P62313 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.6□□□□□ -0.23
Lsm6P62313 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.6□□□□□ -0.23
Lsm6P62313 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Lsm6P62313 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.6□□□□□ -0.23
Lsm6P62313 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Lsm6P62313 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Lsm6P62313 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.6□□□□□ -0.23
Lsm6P62313 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.6□□□□□ -0.23
Lsm6P62313 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Lsm6P62313 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm6P62313 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm6P62313 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm6P62313 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm6P62313 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Lsm6P62313 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm6P62313 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm6P62313 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm6P62313 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.59□□□□□ -0.23
Lsm6P62313 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm6P62313 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm6P62313 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm6P62313 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms